Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.32■□□□□ 0.84
COL1A2P08123 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.32■□□□□ 0.84
COL1A2P08123 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A2P08123 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A2P08123 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A2P08123 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.32■□□□□ 0.84
COL1A2P08123 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.32■□□□□ 0.84
COL1A2P08123 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.32■□□□□ 0.84
COL1A2P08123 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL1A2P08123 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A2P08123 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A2P08123 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL1A2P08123 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL1A2P08123 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A2P08123 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A2P08123 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A2P08123 RN7SL606P-201ENST00000472779 293 ntBASIC20.31■□□□□ 0.84
COL1A2P08123 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A2P08123 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.31■□□□□ 0.84
COL1A2P08123 AL121894.2-201ENST00000602977 491 ntBASIC20.31■□□□□ 0.84
COL1A2P08123 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A2P08123 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A2P08123 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A2P08123 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL1A2P08123 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COL1A2P08123 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A2P08123 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL1A2P08123 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A2P08123 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.3■□□□□ 0.84
COL1A2P08123 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A2P08123 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 AP000867.3-201ENST00000524675 377 ntBASIC20.3■□□□□ 0.84
COL1A2P08123 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A2P08123 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL1A2P08123 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
COL1A2P08123 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL1A2P08123 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 AC233702.3-201ENST00000578656 1387 ntBASIC20.29■□□□□ 0.84
COL1A2P08123 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 TPM4P1-201ENST00000436100 807 ntBASIC20.29■□□□□ 0.84
COL1A2P08123 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL1A2P08123 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.29■□□□□ 0.84
COL1A2P08123 AC111152.3-201ENST00000569699 673 ntBASIC20.29■□□□□ 0.84
COL1A2P08123 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 AC004263.2-201ENST00000617183 678 ntBASIC20.29■□□□□ 0.84
COL1A2P08123 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.29■□□□□ 0.84
COL1A2P08123 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A2P08123 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL1A2P08123 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A2P08123 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL1A2P08123 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A2P08123 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.29■□□□□ 0.84
COL1A2P08123 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
COL1A2P08123 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A2P08123 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL1A2P08123 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A2P08123 SDHAP2-201ENST00000455183 2001 ntBASIC20.28■□□□□ 0.84
COL1A2P08123 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL1A2P08123 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms