Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 TSPY12P-201ENST00000421279 868 ntBASIC18.68■□□□□ 0.58
RETP07949 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.68■□□□□ 0.58
RETP07949 SEC1P-202ENST00000473944 940 ntBASIC18.68■□□□□ 0.58
RETP07949 RNF126P1-202ENST00000569893 925 ntBASIC18.68■□□□□ 0.58
RETP07949 AC090616.6-201ENST00000582640 721 ntBASIC18.68■□□□□ 0.58
RETP07949 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.68■□□□□ 0.58
RETP07949 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.68■□□□□ 0.58
RETP07949 AL157888.1-201ENST00000631930 593 ntBASIC18.68■□□□□ 0.58
RETP07949 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.68■□□□□ 0.58
RETP07949 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RETP07949 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.68■□□□□ 0.58
RETP07949 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RETP07949 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RETP07949 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
RETP07949 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.67■□□□□ 0.58
RETP07949 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.67■□□□□ 0.58
RETP07949 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RETP07949 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RETP07949 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 MIR1233-2-201ENST00000408138 82 ntBASIC18.67■□□□□ 0.58
RETP07949 MIR1233-1-201ENST00000408722 82 ntBASIC18.67■□□□□ 0.58
RETP07949 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
RETP07949 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RETP07949 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.67■□□□□ 0.58
RETP07949 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.67■□□□□ 0.58
RETP07949 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.67■□□□□ 0.58
RETP07949 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.67■□□□□ 0.58
RETP07949 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.67■□□□□ 0.58
RETP07949 AC074051.2-201ENST00000565115 352 ntBASIC18.67■□□□□ 0.58
RETP07949 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.67■□□□□ 0.58
RETP07949 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.67■□□□□ 0.58
RETP07949 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
RETP07949 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.67■□□□□ 0.58
RETP07949 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RETP07949 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RETP07949 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RETP07949 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RETP07949 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.66■□□□□ 0.58
RETP07949 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.66■□□□□ 0.58
RETP07949 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
RETP07949 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 FAM220CP-201ENST00000395253 831 ntBASIC18.66■□□□□ 0.58
RETP07949 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.66■□□□□ 0.58
RETP07949 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RETP07949 AP001005.1-201ENST00000571755 1248 ntBASIC18.66■□□□□ 0.58
RETP07949 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RETP07949 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RETP07949 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RETP07949 IL9RP2-201ENST00000423948 1312 ntBASIC18.66■□□□□ 0.58
RETP07949 GPAT2P1-201ENST00000444924 1672 ntBASIC18.66■□□□□ 0.58
RETP07949 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
RETP07949 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RETP07949 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.65■□□□□ 0.58
RETP07949 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RETP07949 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RETP07949 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.65■□□□□ 0.58
RETP07949 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RETP07949 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.65■□□□□ 0.58
RETP07949 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 KRT18P58-201ENST00000527480 1120 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms