Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CAPN1P07384 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CAPN1P07384 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CAPN1P07384 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 AC091390.4-202ENST00000476426 537 ntBASIC18.27■□□□□ 0.52
CAPN1P07384 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPN1P07384 C2orf69P3-201ENST00000565542 1120 ntBASIC18.27■□□□□ 0.52
CAPN1P07384 SLC25A1P4-201ENST00000567977 778 ntBASIC18.27■□□□□ 0.52
CAPN1P07384 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CAPN1P07384 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPN1P07384 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CAPN1P07384 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPN1P07384 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.27■□□□□ 0.51
CAPN1P07384 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CAPN1P07384 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CAPN1P07384 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.26■□□□□ 0.51
CAPN1P07384 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPN1P07384 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 HEIH-201ENST00000623091 1652 ntBASIC18.26■□□□□ 0.51
CAPN1P07384 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 INGX-201ENST00000359239 846 ntBASIC18.26■□□□□ 0.51
CAPN1P07384 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.26■□□□□ 0.51
CAPN1P07384 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.26■□□□□ 0.51
CAPN1P07384 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.26■□□□□ 0.51
CAPN1P07384 AL445228.2-201ENST00000605589 952 ntBASIC18.26■□□□□ 0.51
CAPN1P07384 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CAPN1P07384 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 AC096733.2-201ENST00000609937 1394 ntBASIC18.26■□□□□ 0.51
CAPN1P07384 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPN1P07384 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPN1P07384 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPN1P07384 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPN1P07384 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.25■□□□□ 0.51
CAPN1P07384 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 AL137013.1-201ENST00000432946 1228 ntBASIC18.25■□□□□ 0.51
CAPN1P07384 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 ECEL1P2-202ENST00000465689 757 ntBASIC18.25■□□□□ 0.51
CAPN1P07384 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.25■□□□□ 0.51
CAPN1P07384 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CAPN1P07384 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPN1P07384 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPN1P07384 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CAPN1P07384 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN1P07384 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN1P07384 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CAPN1P07384 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms