Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DHFRP00374 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DHFRP00374 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.07■□□□□ 0.16
DHFRP00374 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.07■□□□□ 0.16
DHFRP00374 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.07■□□□□ 0.16
DHFRP00374 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DHFRP00374 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
DHFRP00374 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.06■□□□□ 0.16
DHFRP00374 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
DHFRP00374 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DHFRP00374 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.06■□□□□ 0.16
DHFRP00374 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.06■□□□□ 0.16
DHFRP00374 AC007322.4-201ENST00000509611 723 ntBASIC16.06■□□□□ 0.16
DHFRP00374 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.06■□□□□ 0.16
DHFRP00374 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DHFRP00374 KRT18P61-201ENST00000585825 1298 ntBASIC16.06■□□□□ 0.16
DHFRP00374 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DHFRP00374 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.06■□□□□ 0.16
DHFRP00374 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.06■□□□□ 0.16
DHFRP00374 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
DHFRP00374 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.05■□□□□ 0.16
DHFRP00374 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 AC026271.2-201ENST00000428091 497 ntBASIC16.05■□□□□ 0.16
DHFRP00374 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
DHFRP00374 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DHFRP00374 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.05■□□□□ 0.16
DHFRP00374 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DHFRP00374 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.04■□□□□ 0.16
DHFRP00374 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DHFRP00374 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.04■□□□□ 0.16
DHFRP00374 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.04■□□□□ 0.16
DHFRP00374 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.04■□□□□ 0.16
DHFRP00374 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.04■□□□□ 0.16
DHFRP00374 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.04■□□□□ 0.16
DHFRP00374 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DHFRP00374 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DHFRP00374 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms