Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 KRT18P28-201ENST00000453838 1332 ntBASIC21.11■□□□□ 0.97
ALDH1A1P00352 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 AC105339.3-201ENST00000560043 636 ntBASIC21.11■□□□□ 0.97
ALDH1A1P00352 AC011467.2-201ENST00000598425 242 ntBASIC21.11■□□□□ 0.97
ALDH1A1P00352 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 AL139288.1-201ENST00000623748 933 ntBASIC21.11■□□□□ 0.97
ALDH1A1P00352 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALDH1A1P00352 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
ALDH1A1P00352 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.1■□□□□ 0.97
ALDH1A1P00352 FEM1AP3-201ENST00000403722 1741 ntBASIC21.1■□□□□ 0.97
ALDH1A1P00352 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.1■□□□□ 0.97
ALDH1A1P00352 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ALDH1A1P00352 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.1■□□□□ 0.97
ALDH1A1P00352 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.1■□□□□ 0.97
ALDH1A1P00352 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALDH1A1P00352 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 HTR5BP-201ENST00000430851 1154 ntBASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC068472.1-201ENST00000474589 881 ntBASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 UNC93B6-202ENST00000528242 690 ntBASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 AC025062.2-201ENST00000605477 670 ntBASIC21.09■□□□□ 0.97
ALDH1A1P00352 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALDH1A1P00352 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.09■□□□□ 0.97
ALDH1A1P00352 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ALDH1A1P00352 AL138831.2-201ENST00000606564 490 ntBASIC21.08■□□□□ 0.97
ALDH1A1P00352 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALDH1A1P00352 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ALDH1A1P00352 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ALDH1A1P00352 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ALDH1A1P00352 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms