Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CLPTM1O96005 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.52■□□□□ 0.4
CLPTM1O96005 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1O96005 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
CLPTM1O96005 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1O96005 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
CLPTM1O96005 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CLPTM1O96005 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.52■□□□□ 0.39
CLPTM1O96005 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
CLPTM1O96005 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1O96005 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 AC011676.5-201ENST00000624864 2660 ntBASIC17.51■□□□□ 0.39
CLPTM1O96005 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1O96005 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1O96005 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1O96005 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.51■□□□□ 0.39
CLPTM1O96005 AL031963.3-201ENST00000606441 850 ntBASIC17.51■□□□□ 0.39
CLPTM1O96005 AC092118.2-201ENST00000613495 667 ntBASIC17.51■□□□□ 0.39
CLPTM1O96005 AL356652.1-201ENST00000615962 565 ntBASIC17.51■□□□□ 0.39
CLPTM1O96005 AC133041.1-202ENST00000642053 222 ntBASIC17.51■□□□□ 0.39
CLPTM1O96005 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1O96005 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.51■□□□□ 0.39
CLPTM1O96005 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 AL118508.1-201ENST00000613502 2345 ntBASIC17.5■□□□□ 0.39
CLPTM1O96005 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLPTM1O96005 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLPTM1O96005 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.5■□□□□ 0.39
CLPTM1O96005 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.5■□□□□ 0.39
CLPTM1O96005 AC087633.2-202ENST00000565166 1439 ntBASIC17.5■□□□□ 0.39
CLPTM1O96005 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLPTM1O96005 DUSP5P2-201ENST00000426873 1033 ntBASIC17.5■□□□□ 0.39
CLPTM1O96005 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CLPTM1O96005 AL589743.5-201ENST00000616611 1050 ntBASIC17.5■□□□□ 0.39
CLPTM1O96005 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLPTM1O96005 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
CLPTM1O96005 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLPTM1O96005 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLPTM1O96005 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CLPTM1O96005 ZNF815P-204ENST00000434898 1737 ntBASIC17.5■□□□□ 0.39
CLPTM1O96005 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CLPTM1O96005 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLPTM1O96005 KRT8P20-201ENST00000423953 1409 ntBASIC17.49■□□□□ 0.39
CLPTM1O96005 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms