Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
BEST1O76090 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BEST1O76090 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.45■□□□□ 0.7
BEST1O76090 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BEST1O76090 PCED1CP-201ENST00000419887 785 ntBASIC19.45■□□□□ 0.7
BEST1O76090 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.45■□□□□ 0.7
BEST1O76090 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
BEST1O76090 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.45■□□□□ 0.7
BEST1O76090 AL136038.3-201ENST00000561909 1096 ntBASIC19.45■□□□□ 0.7
BEST1O76090 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.45■□□□□ 0.7
BEST1O76090 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
BEST1O76090 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.45■□□□□ 0.7
BEST1O76090 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST1O76090 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BEST1O76090 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.45■□□□□ 0.7
BEST1O76090 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST1O76090 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST1O76090 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.44■□□□□ 0.7
BEST1O76090 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
BEST1O76090 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
BEST1O76090 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST1O76090 PVRIG2P-201ENST00000435460 978 ntBASIC19.44■□□□□ 0.7
BEST1O76090 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.44■□□□□ 0.7
BEST1O76090 SDHAP2-201ENST00000455183 2001 ntBASIC19.44■□□□□ 0.7
BEST1O76090 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST1O76090 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.44■□□□□ 0.7
BEST1O76090 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
BEST1O76090 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.43■□□□□ 0.7
BEST1O76090 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.43■□□□□ 0.7
BEST1O76090 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST1O76090 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST1O76090 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST1O76090 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BEST1O76090 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST1O76090 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST1O76090 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST1O76090 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
BEST1O76090 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST1O76090 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.42■□□□□ 0.7
BEST1O76090 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.42■□□□□ 0.7
BEST1O76090 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
BEST1O76090 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.42■□□□□ 0.7
BEST1O76090 AC116407.4-201ENST00000623319 1061 ntBASIC19.42■□□□□ 0.7
BEST1O76090 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.42■□□□□ 0.7
BEST1O76090 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST1O76090 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST1O76090 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST1O76090 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.41■□□□□ 0.7
BEST1O76090 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST1O76090 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms