Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.3■□□□□ 0.68
LRCH4O75427 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.3■□□□□ 0.68
LRCH4O75427 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 FAM87A-204ENST00000613235 858 ntBASIC19.3■□□□□ 0.68
LRCH4O75427 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCH4O75427 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 KRT18P23-201ENST00000435622 1283 ntBASIC19.29■□□□□ 0.68
LRCH4O75427 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCH4O75427 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.29■□□□□ 0.68
LRCH4O75427 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LRCH4O75427 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRCH4O75427 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRCH4O75427 AC093677.2-201ENST00000600169 1863 ntBASIC19.28■□□□□ 0.68
LRCH4O75427 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRCH4O75427 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 KRT8P7-201ENST00000533003 1432 ntBASIC19.28■□□□□ 0.68
LRCH4O75427 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.28■□□□□ 0.68
LRCH4O75427 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.28■□□□□ 0.68
LRCH4O75427 AC128688.1-201ENST00000487626 519 ntBASIC19.28■□□□□ 0.68
LRCH4O75427 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.28■□□□□ 0.68
LRCH4O75427 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.28■□□□□ 0.68
LRCH4O75427 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.28■□□□□ 0.68
LRCH4O75427 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH4O75427 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRCH4O75427 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH4O75427 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
LRCH4O75427 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRCH4O75427 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH4O75427 AL163051.1-201ENST00000569214 1512 ntBASIC19.27■□□□□ 0.68
LRCH4O75427 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms