Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF40O75150 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 CRYGFP-201ENST00000418459 633 ntBASIC19.99■□□□□ 0.79
RNF40O75150 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 TUBB8P6-201ENST00000436895 1288 ntBASIC19.99■□□□□ 0.79
RNF40O75150 AC097488.1-201ENST00000507834 756 ntBASIC19.99■□□□□ 0.79
RNF40O75150 EGLN1P1-201ENST00000531623 762 ntBASIC19.99■□□□□ 0.79
RNF40O75150 AC087388.1-201ENST00000571370 1112 ntBASIC19.99■□□□□ 0.79
RNF40O75150 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 KRT16P6-202ENST00000425692 1426 ntBASIC19.99■□□□□ 0.79
RNF40O75150 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
RNF40O75150 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF40O75150 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF40O75150 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF40O75150 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF40O75150 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF40O75150 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF40O75150 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF40O75150 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 KRT18P16-201ENST00000510337 1294 ntBASIC19.98■□□□□ 0.79
RNF40O75150 AC131212.4-201ENST00000623606 975 ntBASIC19.98■□□□□ 0.79
RNF40O75150 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF40O75150 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF40O75150 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF40O75150 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF40O75150 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF40O75150 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 AP001271.2-201ENST00000624018 1556 ntBASIC19.97■□□□□ 0.79
RNF40O75150 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RNF40O75150 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 TSPY14P-201ENST00000303979 915 ntBASIC19.97■□□□□ 0.79
RNF40O75150 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF40O75150 AC006011.2-201ENST00000621313 1158 ntBASIC19.97■□□□□ 0.79
RNF40O75150 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF40O75150 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF40O75150 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF40O75150 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF40O75150 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF40O75150 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms