Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PDE6DO43924 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.39□□□□□ -0.11
PDE6DO43924 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.39□□□□□ -0.11
PDE6DO43924 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.39□□□□□ -0.11
PDE6DO43924 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PDE6DO43924 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PDE6DO43924 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDE6DO43924 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.38□□□□□ -0.11
PDE6DO43924 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDE6DO43924 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.38□□□□□ -0.11
PDE6DO43924 AP006587.1-201ENST00000534129 1502 ntBASIC14.38□□□□□ -0.11
PDE6DO43924 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.38□□□□□ -0.11
PDE6DO43924 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PDE6DO43924 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.38□□□□□ -0.11
PDE6DO43924 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PDE6DO43924 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDE6DO43924 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PDE6DO43924 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PDE6DO43924 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 AL121761.2-201ENST00000598007 1648 ntBASIC14.37□□□□□ -0.11
PDE6DO43924 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.37□□□□□ -0.11
PDE6DO43924 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.37□□□□□ -0.11
PDE6DO43924 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.37□□□□□ -0.11
PDE6DO43924 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PDE6DO43924 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 NKILA-202ENST00000614771 2598 ntBASIC14.37□□□□□ -0.11
PDE6DO43924 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PDE6DO43924 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.37□□□□□ -0.11
PDE6DO43924 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDE6DO43924 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDE6DO43924 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms