Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.8■□□□□ 0.6
KDELR3O43731 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.8■□□□□ 0.6
KDELR3O43731 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.8■□□□□ 0.6
KDELR3O43731 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KDELR3O43731 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
KDELR3O43731 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.79■□□□□ 0.6
KDELR3O43731 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 AC009102.3-201ENST00000623118 1491 ntBASIC18.79■□□□□ 0.6
KDELR3O43731 AC126763.1-201ENST00000552015 2118 ntBASIC18.79■□□□□ 0.6
KDELR3O43731 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.79■□□□□ 0.6
KDELR3O43731 AL031133.1-201ENST00000406807 723 ntBASIC18.79■□□□□ 0.6
KDELR3O43731 AL671277.2-201ENST00000458060 996 ntBASIC18.79■□□□□ 0.6
KDELR3O43731 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.79■□□□□ 0.6
KDELR3O43731 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.79■□□□□ 0.6
KDELR3O43731 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KDELR3O43731 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDELR3O43731 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KDELR3O43731 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 LINC01311-201ENST00000565162 1445 ntBASIC18.78■□□□□ 0.6
KDELR3O43731 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.78■□□□□ 0.6
KDELR3O43731 HBZP1-201ENST00000354915 429 ntBASIC18.78■□□□□ 0.6
KDELR3O43731 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.78■□□□□ 0.6
KDELR3O43731 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.78■□□□□ 0.6
KDELR3O43731 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.78■□□□□ 0.6
KDELR3O43731 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.78■□□□□ 0.6
KDELR3O43731 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 AL391807.1-203ENST00000604392 2365 ntBASIC18.78■□□□□ 0.6
KDELR3O43731 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
KDELR3O43731 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDELR3O43731 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
KDELR3O43731 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
KDELR3O43731 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
KDELR3O43731 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.77■□□□□ 0.6
KDELR3O43731 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
KDELR3O43731 ARMC10P1-201ENST00000313754 855 ntBASIC18.77■□□□□ 0.6
KDELR3O43731 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.77■□□□□ 0.6
KDELR3O43731 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.77■□□□□ 0.6
KDELR3O43731 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.77■□□□□ 0.6
KDELR3O43731 AC087388.1-201ENST00000571370 1112 ntBASIC18.77■□□□□ 0.6
KDELR3O43731 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.77■□□□□ 0.6
KDELR3O43731 AL136038.4-201ENST00000603606 1261 ntBASIC18.77■□□□□ 0.6
KDELR3O43731 SDHAP2-201ENST00000455183 2001 ntBASIC18.77■□□□□ 0.6
KDELR3O43731 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 WIZP1-201ENST00000531444 2299 ntBASIC18.77■□□□□ 0.6
KDELR3O43731 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDELR3O43731 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
KDELR3O43731 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
KDELR3O43731 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KDELR3O43731 AC073592.3-201ENST00000625118 1834 ntBASIC18.77■□□□□ 0.59
KDELR3O43731 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDELR3O43731 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDELR3O43731 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDELR3O43731 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDELR3O43731 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDELR3O43731 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
KDELR3O43731 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms