Protein–RNA interactions for Protein: O43272

PRODH, Proline dehydrogenase 1, mitochondrial, humanhuman

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRODHO43272 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PRODHO43272 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PRODHO43272 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.85■□□□□ 0.29
PRODHO43272 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.85■□□□□ 0.29
PRODHO43272 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.85■□□□□ 0.29
PRODHO43272 SLC25A6P5-201ENST00000435663 894 ntBASIC16.85■□□□□ 0.29
PRODHO43272 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.85■□□□□ 0.29
PRODHO43272 UNC93B5-201ENST00000530315 699 ntBASIC16.85■□□□□ 0.29
PRODHO43272 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.85■□□□□ 0.29
PRODHO43272 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.85■□□□□ 0.29
PRODHO43272 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.85■□□□□ 0.29
PRODHO43272 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.85■□□□□ 0.29
PRODHO43272 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PRODHO43272 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PRODHO43272 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PRODHO43272 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.85■□□□□ 0.29
PRODHO43272 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRODHO43272 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRODHO43272 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.84■□□□□ 0.29
PRODHO43272 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.84■□□□□ 0.29
PRODHO43272 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.84■□□□□ 0.29
PRODHO43272 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.84■□□□□ 0.29
PRODHO43272 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.84■□□□□ 0.29
PRODHO43272 AC112777.1-201ENST00000540175 1423 ntBASIC16.84■□□□□ 0.29
PRODHO43272 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.84■□□□□ 0.29
PRODHO43272 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PRODHO43272 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.84■□□□□ 0.29
PRODHO43272 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PRODHO43272 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRODHO43272 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRODHO43272 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.83■□□□□ 0.29
PRODHO43272 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.83■□□□□ 0.29
PRODHO43272 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PRODHO43272 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PRODHO43272 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRODHO43272 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.83■□□□□ 0.28
PRODHO43272 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PRODHO43272 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.83■□□□□ 0.28
PRODHO43272 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.83■□□□□ 0.28
PRODHO43272 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRODHO43272 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.83■□□□□ 0.28
PRODHO43272 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PRODHO43272 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRODHO43272 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.82■□□□□ 0.28
PRODHO43272 AC134043.2-201ENST00000624206 2238 ntBASIC16.82■□□□□ 0.28
PRODHO43272 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
PRODHO43272 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.82■□□□□ 0.28
PRODHO43272 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRODHO43272 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms