Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.1■□□□□ 0.81
TNRC18O15417 FAM86GP-201ENST00000448322 971 ntBASIC20.1■□□□□ 0.81
TNRC18O15417 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.1■□□□□ 0.81
TNRC18O15417 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.09■□□□□ 0.81
TNRC18O15417 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNRC18O15417 COX5BP8-201ENST00000416911 349 ntBASIC20.09■□□□□ 0.81
TNRC18O15417 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.09■□□□□ 0.81
TNRC18O15417 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TNRC18O15417 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.09■□□□□ 0.81
TNRC18O15417 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.09■□□□□ 0.81
TNRC18O15417 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.09■□□□□ 0.81
TNRC18O15417 HILS1-202ENST00000545329 423 ntBASIC20.09■□□□□ 0.81
TNRC18O15417 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.09■□□□□ 0.81
TNRC18O15417 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.09■□□□□ 0.81
TNRC18O15417 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNRC18O15417 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
TNRC18O15417 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.08■□□□□ 0.81
TNRC18O15417 AC010336.2-201ENST00000564226 506 ntBASIC20.08■□□□□ 0.81
TNRC18O15417 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.08■□□□□ 0.81
TNRC18O15417 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.08■□□□□ 0.81
TNRC18O15417 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.08■□□□□ 0.81
TNRC18O15417 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TNRC18O15417 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNRC18O15417 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.08■□□□□ 0.8
TNRC18O15417 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TNRC18O15417 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.08■□□□□ 0.8
TNRC18O15417 AC055876.3-201ENST00000431496 288 ntBASIC20.08■□□□□ 0.8
TNRC18O15417 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.08■□□□□ 0.8
TNRC18O15417 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
TNRC18O15417 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 AC138649.4-201ENST00000612222 287 ntBASIC20.08■□□□□ 0.8
TNRC18O15417 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNRC18O15417 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.08■□□□□ 0.8
TNRC18O15417 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 RN7SL692P-201ENST00000464677 288 ntBASIC20.07■□□□□ 0.8
TNRC18O15417 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.07■□□□□ 0.8
TNRC18O15417 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TNRC18O15417 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TNRC18O15417 AC011467.2-201ENST00000598425 242 ntBASIC20.07■□□□□ 0.8
TNRC18O15417 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.07■□□□□ 0.8
TNRC18O15417 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TNRC18O15417 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
TNRC18O15417 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TNRC18O15417 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNRC18O15417 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.07■□□□□ 0.8
TNRC18O15417 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.07■□□□□ 0.8
TNRC18O15417 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 AC112777.1-201ENST00000540175 1423 ntBASIC20.06■□□□□ 0.8
TNRC18O15417 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.06■□□□□ 0.8
TNRC18O15417 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 AC136632.2-201ENST00000512891 861 ntBASIC20.06■□□□□ 0.8
TNRC18O15417 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.06■□□□□ 0.8
TNRC18O15417 AC005593.1-201ENST00000624894 515 ntBASIC20.06■□□□□ 0.8
TNRC18O15417 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNRC18O15417 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms