Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.78■□□□□ 0.28
SURF4O15260 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.78■□□□□ 0.28
SURF4O15260 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.77■□□□□ 0.28
SURF4O15260 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 AC138028.4-201ENST00000564984 1845 ntBASIC16.77■□□□□ 0.28
SURF4O15260 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SURF4O15260 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SURF4O15260 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SURF4O15260 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.77■□□□□ 0.28
SURF4O15260 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
SURF4O15260 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.77■□□□□ 0.28
SURF4O15260 AC004980.1-204ENST00000429707 299 ntBASIC16.77■□□□□ 0.28
SURF4O15260 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 AC233263.1-201ENST00000578059 224 ntBASIC16.77■□□□□ 0.28
SURF4O15260 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SURF4O15260 AL023875.1-201ENST00000640777 796 ntBASIC16.77■□□□□ 0.28
SURF4O15260 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.77■□□□□ 0.28
SURF4O15260 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SURF4O15260 BCL2-203ENST00000589955 5011 ntBASIC16.77■□□□□ 0.28
SURF4O15260 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SURF4O15260 AC134043.2-201ENST00000624206 2238 ntBASIC16.77■□□□□ 0.27
SURF4O15260 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SURF4O15260 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SURF4O15260 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 GNAS-203ENST00000306120 1878 ntBASIC16.76■□□□□ 0.27
SURF4O15260 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
SURF4O15260 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
SURF4O15260 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 KRASP1-201ENST00000407852 552 ntBASIC16.76■□□□□ 0.27
SURF4O15260 SLC25A6P5-201ENST00000435663 894 ntBASIC16.76■□□□□ 0.27
SURF4O15260 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.76■□□□□ 0.27
SURF4O15260 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 FAM197Y4-202ENST00000622692 608 ntBASIC16.76■□□□□ 0.27
SURF4O15260 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.76■□□□□ 0.27
SURF4O15260 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.76■□□□□ 0.27
SURF4O15260 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SURF4O15260 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.76■□□□□ 0.27
SURF4O15260 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SURF4O15260 RCC2P3-201ENST00000418112 1537 ntBASIC16.75■□□□□ 0.27
SURF4O15260 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.75■□□□□ 0.27
SURF4O15260 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.75■□□□□ 0.27
SURF4O15260 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.75■□□□□ 0.27
SURF4O15260 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SURF4O15260 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.75■□□□□ 0.27
SURF4O15260 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.75■□□□□ 0.27
SURF4O15260 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SURF4O15260 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms