Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC29.95■■■□□ 2.38
CHD1O14646 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
CHD1O14646 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CHD1O14646 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC29.94■■■□□ 2.38
CHD1O14646 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC29.94■■■□□ 2.38
CHD1O14646 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC29.94■■■□□ 2.38
CHD1O14646 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CHD1O14646 PRSS29P-201ENST00000440800 595 ntBASIC29.94■■■□□ 2.38
CHD1O14646 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
CHD1O14646 AC092865.6-201ENST00000642101 219 ntBASIC29.94■■■□□ 2.38
CHD1O14646 ELL2P1-201ENST00000413990 1906 ntBASIC29.94■■■□□ 2.38
CHD1O14646 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHD1O14646 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHD1O14646 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC29.93■■■□□ 2.38
CHD1O14646 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC29.93■■■□□ 2.38
CHD1O14646 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC29.93■■■□□ 2.38
CHD1O14646 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC29.93■■■□□ 2.38
CHD1O14646 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC29.93■■■□□ 2.38
CHD1O14646 AC093512.1-201ENST00000617969 520 ntBASIC29.93■■■□□ 2.38
CHD1O14646 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC29.93■■■□□ 2.38
CHD1O14646 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1O14646 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1O14646 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
CHD1O14646 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1O14646 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC29.93■■■□□ 2.38
CHD1O14646 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC29.93■■■□□ 2.38
CHD1O14646 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1O14646 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC29.93■■■□□ 2.38
CHD1O14646 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHD1O14646 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC29.93■■■□□ 2.38
CHD1O14646 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC29.93■■■□□ 2.38
CHD1O14646 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC29.93■■■□□ 2.38
CHD1O14646 PUDP-206ENST00000540122 825 ntTSL 2 BASIC29.93■■■□□ 2.38
CHD1O14646 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
CHD1O14646 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC29.92■■■□□ 2.38
CHD1O14646 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC29.92■■■□□ 2.38
CHD1O14646 MKNK2P1-201ENST00000437526 628 ntBASIC29.92■■■□□ 2.38
CHD1O14646 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC29.92■■■□□ 2.38
CHD1O14646 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC29.92■■■□□ 2.38
CHD1O14646 SDCCAG3P1-201ENST00000589292 1150 ntBASIC29.92■■■□□ 2.38
CHD1O14646 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC29.92■■■□□ 2.38
CHD1O14646 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHD1O14646 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHD1O14646 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHD1O14646 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHD1O14646 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
CHD1O14646 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 AC018845.2-201ENST00000568326 409 ntBASIC29.91■■■□□ 2.38
CHD1O14646 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC29.91■■■□□ 2.38
CHD1O14646 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC29.91■■■□□ 2.38
CHD1O14646 Z98044.1-201ENST00000632503 1764 ntBASIC29.91■■■□□ 2.38
CHD1O14646 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
CHD1O14646 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CHD1O14646 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC29.91■■■□□ 2.38
CHD1O14646 AC125634.1-201ENST00000438758 1403 ntBASIC29.91■■■□□ 2.38
CHD1O14646 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC29.91■■■□□ 2.38
CHD1O14646 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC29.91■■■□□ 2.38
CHD1O14646 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC29.91■■■□□ 2.38
CHD1O14646 C20orf181-201ENST00000623918 480 ntBASIC29.91■■■□□ 2.38
CHD1O14646 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1O14646 GOLGA6L17P-202ENST00000614358 1398 ntBASIC29.9■■■□□ 2.38
CHD1O14646 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
CHD1O14646 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC29.9■■■□□ 2.38
CHD1O14646 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.9■■■□□ 2.38
CHD1O14646 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1O14646 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1O14646 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC29.9■■■□□ 2.38
CHD1O14646 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHD1O14646 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC29.9■■■□□ 2.38
CHD1O14646 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC29.9■■■□□ 2.38
CHD1O14646 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHD1O14646 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHD1O14646 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
CHD1O14646 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC29.89■■■□□ 2.38
CHD1O14646 AC007274.1-201ENST00000439805 662 ntBASIC29.89■■■□□ 2.38
CHD1O14646 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC29.89■■■□□ 2.38
CHD1O14646 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC29.89■■■□□ 2.38
CHD1O14646 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC29.89■■■□□ 2.38
CHD1O14646 AC073314.1-201ENST00000568729 2216 ntBASIC29.89■■■□□ 2.38
CHD1O14646 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHD1O14646 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CHD1O14646 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC29.88■■■□□ 2.37
CHD1O14646 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
CHD1O14646 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
CHD1O14646 RBM7-207ENST00000544582 692 ntTSL 3 BASIC29.88■■■□□ 2.37
CHD1O14646 AC005498.2-205ENST00000593218 784 ntBASIC29.88■■■□□ 2.37
CHD1O14646 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
CHD1O14646 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
CHD1O14646 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms