Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
COPEO14579 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPEO14579 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPEO14579 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COPEO14579 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
COPEO14579 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COPEO14579 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COPEO14579 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
COPEO14579 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.58■□□□□ 0.56
COPEO14579 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.58■□□□□ 0.56
COPEO14579 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
COPEO14579 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.58■□□□□ 0.56
COPEO14579 Z85996.1-201ENST00000494644 937 ntBASIC18.58■□□□□ 0.56
COPEO14579 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.58■□□□□ 0.56
COPEO14579 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.58■□□□□ 0.56
COPEO14579 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPEO14579 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.58■□□□□ 0.56
COPEO14579 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.58■□□□□ 0.56
COPEO14579 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.58■□□□□ 0.56
COPEO14579 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPEO14579 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPEO14579 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPEO14579 AC138028.4-201ENST00000564984 1845 ntBASIC18.58■□□□□ 0.56
COPEO14579 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
COPEO14579 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COPEO14579 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPEO14579 KRT8P11-201ENST00000409686 1436 ntBASIC18.57■□□□□ 0.56
COPEO14579 KRT8P3-201ENST00000519669 1449 ntBASIC18.57■□□□□ 0.56
COPEO14579 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.57■□□□□ 0.56
COPEO14579 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.57■□□□□ 0.56
COPEO14579 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.57■□□□□ 0.56
COPEO14579 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.57■□□□□ 0.56
COPEO14579 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 LINC00896-202ENST00000609602 2128 ntBASIC18.57■□□□□ 0.56
COPEO14579 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.57■□□□□ 0.56
COPEO14579 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
COPEO14579 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COPEO14579 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
COPEO14579 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPEO14579 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COPEO14579 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COPEO14579 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.56■□□□□ 0.56
COPEO14579 SLC25A6P5-201ENST00000435663 894 ntBASIC18.56■□□□□ 0.56
COPEO14579 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.56■□□□□ 0.56
COPEO14579 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
COPEO14579 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.56■□□□□ 0.56
COPEO14579 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
COPEO14579 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.56■□□□□ 0.56
COPEO14579 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPEO14579 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.55■□□□□ 0.56
COPEO14579 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.55■□□□□ 0.56
COPEO14579 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COPEO14579 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.55■□□□□ 0.56
COPEO14579 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.55■□□□□ 0.56
COPEO14579 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COPEO14579 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COPEO14579 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.55■□□□□ 0.56
COPEO14579 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms