Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN4O00479 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN4O00479 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN4O00479 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN4O00479 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGN4O00479 AP000593.1-201ENST00000393668 712 ntBASIC17.27■□□□□ 0.36
HMGN4O00479 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGN4O00479 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGN4O00479 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.27■□□□□ 0.36
HMGN4O00479 AP005242.2-201ENST00000580065 1175 ntBASIC17.27■□□□□ 0.36
HMGN4O00479 MIR4674-201ENST00000582457 87 ntBASIC17.27■□□□□ 0.36
HMGN4O00479 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
HMGN4O00479 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HMGN4O00479 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGN4O00479 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
HMGN4O00479 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGN4O00479 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.27■□□□□ 0.35
HMGN4O00479 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGN4O00479 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGN4O00479 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HMGN4O00479 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGN4O00479 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGN4O00479 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGN4O00479 AP003071.4-201ENST00000562276 1284 ntBASIC17.26■□□□□ 0.35
HMGN4O00479 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 KRT8P50-201ENST00000562022 1438 ntBASIC17.26■□□□□ 0.35
HMGN4O00479 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGN4O00479 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMGN4O00479 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
HMGN4O00479 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGN4O00479 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN4O00479 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN4O00479 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN4O00479 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGN4O00479 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGN4O00479 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN4O00479 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGN4O00479 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGN4O00479 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGN4O00479 MIR3180-5-201ENST00000583743 153 ntBASIC17.25■□□□□ 0.35
HMGN4O00479 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGN4O00479 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN4O00479 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGN4O00479 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGN4O00479 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGN4O00479 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGN4O00479 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGN4O00479 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.24■□□□□ 0.35
HMGN4O00479 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGN4O00479 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms