Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 AC008556.1-201ENST00000610908 2040 ntBASIC17.89■□□□□ 0.45
SLC28A1O00337 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC28A1O00337 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC28A1O00337 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC28A1O00337 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A1O00337 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SLC28A1O00337 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A1O00337 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
SLC28A1O00337 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC28A1O00337 AP000593.1-201ENST00000393668 712 ntBASIC17.88■□□□□ 0.45
SLC28A1O00337 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC28A1O00337 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A1O00337 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A1O00337 AC135776.1-201ENST00000319817 2481 ntBASIC17.88■□□□□ 0.45
SLC28A1O00337 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A1O00337 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC28A1O00337 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A1O00337 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A1O00337 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC28A1O00337 MIR564-202ENST00000385049 94 ntBASIC17.87■□□□□ 0.45
SLC28A1O00337 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SLC28A1O00337 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SLC28A1O00337 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A1O00337 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC28A1O00337 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC28A1O00337 CD177P1-201ENST00000606252 935 ntBASIC17.87■□□□□ 0.45
SLC28A1O00337 AC008622.2-201ENST00000617006 1229 ntBASIC17.87■□□□□ 0.45
SLC28A1O00337 ITM2C-210ENST00000620962 501 ntBASIC17.87■□□□□ 0.45
SLC28A1O00337 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC28A1O00337 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 AC096733.2-201ENST00000609937 1394 ntBASIC17.87■□□□□ 0.45
SLC28A1O00337 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SLC28A1O00337 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A1O00337 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 LETM1P2-201ENST00000597330 2178 ntBASIC17.86■□□□□ 0.45
SLC28A1O00337 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 KRT18P29-201ENST00000397031 1267 ntBASIC17.86■□□□□ 0.45
SLC28A1O00337 AL023284.2-201ENST00000405850 579 ntBASIC17.86■□□□□ 0.45
SLC28A1O00337 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.86■□□□□ 0.45
SLC28A1O00337 MCCD1P1-208ENST00000445732 328 ntBASIC17.86■□□□□ 0.45
SLC28A1O00337 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.86■□□□□ 0.45
SLC28A1O00337 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 DGCR10-201ENST00000609839 495 ntBASIC17.86■□□□□ 0.45
SLC28A1O00337 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A1O00337 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A1O00337 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A1O00337 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms