Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
EIF3FO00303 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.14■□□□□ 0.49
EIF3FO00303 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 AC145285.6-201ENST00000604632 637 ntBASIC18.14■□□□□ 0.49
EIF3FO00303 AC112497.1-201ENST00000624824 639 ntBASIC18.14■□□□□ 0.49
EIF3FO00303 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.14■□□□□ 0.49
EIF3FO00303 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EIF3FO00303 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EIF3FO00303 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 LINC01568-207ENST00000641790 1380 ntBASIC18.14■□□□□ 0.49
EIF3FO00303 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.14■□□□□ 0.49
EIF3FO00303 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.14■□□□□ 0.49
EIF3FO00303 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EIF3FO00303 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.13■□□□□ 0.49
EIF3FO00303 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 AL163051.1-201ENST00000569214 1512 ntBASIC18.13■□□□□ 0.49
EIF3FO00303 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
EIF3FO00303 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EIF3FO00303 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
EIF3FO00303 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 INGX-201ENST00000359239 846 ntBASIC18.13■□□□□ 0.49
EIF3FO00303 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
EIF3FO00303 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.13■□□□□ 0.49
EIF3FO00303 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.13■□□□□ 0.49
EIF3FO00303 AC104390.1-201ENST00000555663 520 ntBASIC18.13■□□□□ 0.49
EIF3FO00303 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.13■□□□□ 0.49
EIF3FO00303 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EIF3FO00303 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.13■□□□□ 0.49
EIF3FO00303 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EIF3FO00303 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.13■□□□□ 0.49
EIF3FO00303 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.13■□□□□ 0.49
EIF3FO00303 AC135050.7-201ENST00000624508 2218 ntBASIC18.13■□□□□ 0.49
EIF3FO00303 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
EIF3FO00303 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.12■□□□□ 0.49
EIF3FO00303 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EIF3FO00303 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.12■□□□□ 0.49
EIF3FO00303 MIR149-201ENST00000384879 89 ntBASIC18.12■□□□□ 0.49
EIF3FO00303 AP000523.1-201ENST00000398242 1049 ntBASIC18.12■□□□□ 0.49
EIF3FO00303 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EIF3FO00303 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.12■□□□□ 0.49
EIF3FO00303 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.12■□□□□ 0.49
EIF3FO00303 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EIF3FO00303 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.12■□□□□ 0.49
EIF3FO00303 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.12■□□□□ 0.49
EIF3FO00303 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.12■□□□□ 0.49
EIF3FO00303 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EIF3FO00303 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms