Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KRT8P50-201ENST00000562022 1438 ntBASIC20.87■□□□□ 0.93
DDX39AO00148 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX39AO00148 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX39AO00148 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
DDX39AO00148 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX39AO00148 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX39AO00148 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.86■□□□□ 0.93
DDX39AO00148 AP000550.4-202ENST00000639755 178 ntBASIC20.86■□□□□ 0.93
DDX39AO00148 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX39AO00148 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX39AO00148 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.86■□□□□ 0.93
DDX39AO00148 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.86■□□□□ 0.93
DDX39AO00148 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DDX39AO00148 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX39AO00148 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DDX39AO00148 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX39AO00148 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.85■□□□□ 0.93
DDX39AO00148 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
DDX39AO00148 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.85■□□□□ 0.93
DDX39AO00148 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX39AO00148 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.85■□□□□ 0.93
DDX39AO00148 AL136038.3-201ENST00000561909 1096 ntBASIC20.85■□□□□ 0.93
DDX39AO00148 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 AL136038.4-201ENST00000603606 1261 ntBASIC20.85■□□□□ 0.93
DDX39AO00148 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.85■□□□□ 0.93
DDX39AO00148 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
DDX39AO00148 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.85■□□□□ 0.93
DDX39AO00148 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DDX39AO00148 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 AL391807.1-203ENST00000604392 2365 ntBASIC20.84■□□□□ 0.93
DDX39AO00148 AP000974.1-201ENST00000623909 2387 ntBASIC20.84■□□□□ 0.93
DDX39AO00148 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.84■□□□□ 0.93
DDX39AO00148 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 AC093458.2-201ENST00000623150 629 ntBASIC20.84■□□□□ 0.93
DDX39AO00148 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.84■□□□□ 0.93
DDX39AO00148 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
DDX39AO00148 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.84■□□□□ 0.93
DDX39AO00148 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
DDX39AO00148 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX39AO00148 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.83■□□□□ 0.93
DDX39AO00148 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms