Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 MIR3180-4-201ENST00000582223 153 ntBASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 AL138966.2-201ENST00000621997 464 ntBASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV5S1A1TA0A578 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV5S1A1TA0A578 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 KRT18P22-201ENST00000402024 1347 ntBASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.33■□□□□ 0.69
TCRBV5S1A1TA0A578 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 ECEL1P3-201ENST00000427961 737 ntBASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 NEK4P2-201ENST00000580004 1012 ntBASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV5S1A1TA0A578 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 PHGDH-209ENST00000641074 1780 ntBASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AC010240.3-201ENST00000607688 395 ntBASIC19.32■□□□□ 0.68
TCRBV5S1A1TA0A578 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms