Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
A0A1W2PRF3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
A0A1W2PRF3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
A0A1W2PRF3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.27■□□□□ 0.03
A0A1W2PRF3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
A0A1W2PRF3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
A0A1W2PRF3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TSPY5P-201ENST00000426936 936 ntBASIC15.26■□□□□ 0.03
A0A1W2PRF3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 AC022616.7-201ENST00000525383 220 ntBASIC15.26■□□□□ 0.03
A0A1W2PRF3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 MIR3180-5-201ENST00000583743 153 ntBASIC15.26■□□□□ 0.03
A0A1W2PRF3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
A0A1W2PRF3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
A0A1W2PRF3 OR6D1P-202ENST00000641007 5290 ntBASIC15.26■□□□□ 0.03
A0A1W2PRF3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 GCSHP2-201ENST00000560971 527 ntBASIC15.25■□□□□ 0.03
A0A1W2PRF3 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 AC099343.3-201ENST00000605834 2503 ntBASIC15.25■□□□□ 0.03
A0A1W2PRF3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.25■□□□□ 0.03
A0A1W2PRF3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
A0A1W2PRF3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
A0A1W2PRF3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
A0A1W2PRF3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.24■□□□□ 0.03
A0A1W2PRF3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
A0A1W2PRF3 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.24■□□□□ 0.03
A0A1W2PRF3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.24■□□□□ 0.03
A0A1W2PRF3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms