Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSPY23P-201ENST00000440136 739 ntBASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF103-CHMP3A0A140T963 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 KRT16P5-201ENST00000455284 522 ntBASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF103-CHMP3A0A140T963 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 AC083906.6-201ENST00000641366 219 ntBASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF103-CHMP3A0A140T963 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms