Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV19A0A0A6YYK7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV19A0A0A6YYK7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV19A0A0A6YYK7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV19A0A0A6YYK7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 AC005332.7-201ENST00000614046 2005 ntBASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 TPM4P1-201ENST00000436100 807 ntBASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 DRAXINP1-201ENST00000437611 948 ntBASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 AC090616.6-201ENST00000582640 721 ntBASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV19A0A0A6YYK7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 AL049812.1-201ENST00000432563 2267 ntBASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 IGHGP-201ENST00000390555 1178 ntBASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 LINC00265-3P-201ENST00000447588 903 ntBASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 TPSP2-201ENST00000561760 610 ntBASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAV19A0A0A6YYK7 AL163051.1-201ENST00000569214 1512 ntBASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 IGHV3-41-201ENST00000613121 348 ntBASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV19A0A0A6YYK7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms