Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 RPPH1-201ENST00000516869 333 ntBASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC142381.4-202ENST00000563973 229 ntBASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC124016.1-201ENST00000609552 612 ntBASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AL353807.1-201ENST00000427475 662 ntBASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 UBE2SP1-201ENST00000450587 669 ntBASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AC233263.1-201ENST00000578059 224 ntBASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-3A0A0A6YYJ7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms