Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 AL121829.2-201ENST00000620908 328 ntBASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV18A0A075B6X5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 AC112777.1-201ENST00000540175 1423 ntBASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 AC068587.9-201ENST00000641814 219 ntBASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 OR6D1P-203ENST00000641209 4860 ntBASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV18A0A075B6X5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 AC092368.3-202ENST00000574180 1591 ntBASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.96■□□□□ 0.14
TRAV18A0A075B6X5 REXO1L9P-201ENST00000604264 2108 ntBASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV18A0A075B6X5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms