Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC021087.4-201ENST00000563761 564 ntBASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 Z83851.2-201ENST00000609564 659 ntBASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 LINC01521-201ENST00000504184 1943 ntBASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCH2Q9Y6C5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 RPS2P1-201ENST00000434010 821 ntBASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 AC040169.1-201ENST00000565382 521 ntBASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCH2Q9Y6C5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 TP73-AS1-210ENST00000637775 1455 ntBASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 RNA5SP415-201ENST00000517246 115 ntBASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 AC012640.2-201ENST00000561606 901 ntBASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 AC099778.1-201ENST00000568593 1911 ntBASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PTCH2Q9Y6C5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTCH2Q9Y6C5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 HLA-J-201ENST00000462773 1622 ntBASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PTCH2Q9Y6C5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.88■□□□□ 0.93
PTCH2Q9Y6C5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms