Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 POM121L3P-201ENST00000419331 1163 ntBASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 AL024508.2-201ENST00000607749 1894 ntBASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 AC243591.1-201ENST00000452967 1364 ntBASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 MINOS1P3-201ENST00000457048 203 ntBASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 SLC25A1P1-201ENST00000528351 927 ntBASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN10AQ9Y5Y9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 MIR149-201ENST00000384879 89 ntBASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 AC079776.4-201ENST00000511039 504 ntBASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 AC006538.3-201ENST00000612495 578 ntBASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 GPALPP1-207ENST00000611650 899 ntBASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 AC148477.8-201ENST00000624298 468 ntBASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN10AQ9Y5Y9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 FAM197Y8-203ENST00000450145 560 ntBASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN10AQ9Y5Y9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 MIR574-201ENST00000385209 96 ntBASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 AL031284.1-201ENST00000419297 478 ntBASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 PMS2P1-201ENST00000431037 1228 ntBASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCN10AQ9Y5Y9 AL590627.1-203ENST00000421194 1026 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms