Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 AC004951.3-201ENST00000418645 1148 ntBASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 GCSHP5-201ENST00000443090 522 ntBASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 AC018470.1-201ENST00000624790 3129 ntBASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.3■□□□□ 0.2
RHBDD3Q9Y3P4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 ABHD17AP1-201ENST00000358206 933 ntBASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHBDD3Q9Y3P4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AL135905.2-201ENST00000584934 1404 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AC126763.1-201ENST00000552015 2118 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 FAM197Y1-201ENST00000421178 764 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AC008040.2-201ENST00000461049 708 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AC026271.3-201ENST00000571884 352 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AC011298.2-201ENST00000617989 482 ntBASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
RHBDD3Q9Y3P4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 ABALON-201ENST00000629058 1903 ntBASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RHBDD3Q9Y3P4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms