Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 C1QL1P1-201ENST00000568105 661 ntBASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 AC008403.3-201ENST00000598924 454 ntBASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB4Q9UN71 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGB4Q9UN71 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGB4Q9UN71 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHGB4Q9UN71 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHGB4Q9UN71 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 AC026366.1-201ENST00000488803 879 ntBASIC18■□□□□ 0.47
PCDHGB4Q9UN71 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 MTDHP1-201ENST00000605323 784 ntBASIC18■□□□□ 0.47
PCDHGB4Q9UN71 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 HLA-A-209ENST00000638375 975 ntBASIC18■□□□□ 0.47
PCDHGB4Q9UN71 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB4Q9UN71 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms