Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC3Q9UN70 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC3Q9UN70 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 SEC1P-202ENST00000473944 940 ntBASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 AC141257.4-201ENST00000634557 245 ntBASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 AC136944.6-201ENST00000634818 245 ntBASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC3Q9UN70 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGC3Q9UN70 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 MIR149-201ENST00000384879 89 ntBASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHGC3Q9UN70 AC135050.7-201ENST00000624508 2218 ntBASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 AP000523.1-201ENST00000398242 1049 ntBASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 AC010203.1-204ENST00000548782 407 ntBASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHGC3Q9UN70 NEFHP1-201ENST00000412845 2629 ntBASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 SDHAP2-201ENST00000455183 2001 ntBASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 AC009102.3-201ENST00000623118 1491 ntBASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 AC113347.1-201ENST00000413321 391 ntBASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 AC010240.3-201ENST00000607688 395 ntBASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGC3Q9UN70 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGC3Q9UN70 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms