Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NOTCH3Q9UM47 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NOTCH3Q9UM47 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.34□□□□□ -0.11
NOTCH3Q9UM47 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.34□□□□□ -0.11
NOTCH3Q9UM47 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 MIR662-201ENST00000384847 95 ntBASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 PVRIG2P-201ENST00000435460 978 ntBASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NOTCH3Q9UM47 ZNF815P-204ENST00000434898 1737 ntBASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 OR6D1P-203ENST00000641209 4860 ntBASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 AP000347.1-202ENST00000435868 847 ntBASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 AC012615.1-201ENST00000565797 1299 ntBASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 LINC01311-201ENST00000565162 1445 ntBASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NOTCH3Q9UM47 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AL671883.3-201ENST00000603274 991 ntBASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AC092119.3-201ENST00000612618 583 ntBASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 SDHAP1-207ENST00000440850 2000 ntBASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 RNF126P1-202ENST00000569893 925 ntBASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 AC020907.5-201ENST00000624372 1936 ntBASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NOTCH3Q9UM47 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NOTCH3Q9UM47 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms