Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC110285.5-201ENST00000611501 352 ntBASIC16.32■□□□□ 0.2
DUX4Q9UBX2 FLJ16779-201ENST00000612722 7638 ntBASIC16.32■□□□□ 0.2
DUX4Q9UBX2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX4Q9UBX2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DUX4Q9UBX2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AC090164.3-201ENST00000610780 2143 ntBASIC16.3■□□□□ 0.2
DUX4Q9UBX2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AC009113.1-201ENST00000570267 2443 ntBASIC16.3■□□□□ 0.2
DUX4Q9UBX2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX4Q9UBX2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX4Q9UBX2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms