Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BLOC1S4Q9NUP1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.64■□□□□ 0.9
BLOC1S4Q9NUP1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 AC073508.3-201ENST00000619697 1419 ntBASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 AC141257.4-201ENST00000634557 245 ntBASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 AC136944.6-201ENST00000634818 245 ntBASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 SDHAP2-201ENST00000455183 2001 ntBASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.64■□□□□ 0.89
BLOC1S4Q9NUP1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AL512604.3-201ENST00000569583 964 ntBASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 NEK4P2-201ENST00000580004 1012 ntBASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 ESPNP-201ENST00000270691 2015 ntBASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BLOC1S4Q9NUP1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BLOC1S4Q9NUP1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms