Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RCN1P1-201ENST00000400413 996 ntBASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 SEC1P-202ENST00000473944 940 ntBASIC19.8■□□□□ 0.76
CISHQ9NSE2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 AC104390.1-201ENST00000555663 520 ntBASIC19.8■□□□□ 0.76
CISHQ9NSE2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 AC073592.3-201ENST00000625118 1834 ntBASIC19.8■□□□□ 0.76
CISHQ9NSE2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 AC104581.1-202ENST00000635932 2618 ntBASIC19.8■□□□□ 0.76
CISHQ9NSE2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
CISHQ9NSE2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CISHQ9NSE2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 BX664615.1-201ENST00000443558 458 ntBASIC19.79■□□□□ 0.76
CISHQ9NSE2 COX11P1-201ENST00000489116 835 ntBASIC19.79■□□□□ 0.76
CISHQ9NSE2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 AL023973.1-201ENST00000624619 620 ntBASIC19.79■□□□□ 0.76
CISHQ9NSE2 AC092865.7-201ENST00000641832 219 ntBASIC19.79■□□□□ 0.76
CISHQ9NSE2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CISHQ9NSE2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CISHQ9NSE2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 AC139887.4-201ENST00000607877 719 ntBASIC19.78■□□□□ 0.76
CISHQ9NSE2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.78■□□□□ 0.76
CISHQ9NSE2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CISHQ9NSE2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 AC009113.1-201ENST00000570267 2443 ntBASIC19.77■□□□□ 0.76
CISHQ9NSE2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CISHQ9NSE2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.77■□□□□ 0.76
CISHQ9NSE2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms