Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 PMS2P1-201ENST00000431037 1228 ntBASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 AC074051.2-201ENST00000565115 352 ntBASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDLIM7Q9NR12 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PDLIM7Q9NR12 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 AKR1C7P-201ENST00000305623 895 ntBASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 MIR564-202ENST00000385049 94 ntBASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 AC112497.1-201ENST00000624824 639 ntBASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 HEIH-201ENST00000623091 1652 ntBASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDLIM7Q9NR12 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 Z83836.1-201ENST00000624605 1642 ntBASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 AF228730.7-201ENST00000641842 219 ntBASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 LINC00167-201ENST00000530583 1419 ntBASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDLIM7Q9NR12 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms