Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 USP32-202ENST00000393003 1868 ntTSL 1 (best) BASIC13□□□□□ -0.331e-5■■■□□ 18
XRN2Q9H0D6 ACADM-208ENST00000526129 1536 ntTSL 212.94□□□□□ -0.341e-5■■■□□ 18
XRN2Q9H0D6 LINC01529-207ENST00000637448 810 ntTSL 5 BASIC12.89□□□□□ -0.355e-8■■■□□ 18
XRN2Q9H0D6 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.351e-5■■■□□ 18
XRN2Q9H0D6 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.351e-5■■■□□ 18
XRN2Q9H0D6 AC060780.1-204ENST00000634994 1985 ntTSL 412.85□□□□□ -0.351e-5■■■□□ 18
XRN2Q9H0D6 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.351e-5■■■□□ 18
XRN2Q9H0D6 DDX41-211ENST00000510171 569 ntTSL 312.85□□□□□ -0.351e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.361e-5■■■□□ 18
XRN2Q9H0D6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.81□□□□□ -0.361e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-212ENST00000480112 5826 ntTSL 1 (best)12.81□□□□□ -0.361e-5■■■□□ 18
XRN2Q9H0D6 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC12.76□□□□□ -0.371e-5■■■□□ 18
XRN2Q9H0D6 WDR73-218ENST00000560966 5071 ntTSL 212.76□□□□□ -0.371e-5■■■□□ 18
XRN2Q9H0D6 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.371e-5■■■□□ 18
XRN2Q9H0D6 RPL18A-206ENST00000600238 954 ntTSL 212.68□□□□□ -0.385e-8■■■□□ 18
XRN2Q9H0D6 AL157392.5-201ENST00000601460 1204 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.381e-5■■■□□ 18
XRN2Q9H0D6 MAT1A-202ENST00000455001 435 ntTSL 512.67□□□□□ -0.381e-5■■■□□ 18
XRN2Q9H0D6 RNF220-210ENST00000474394 810 ntTSL 312.59□□□□□ -0.391e-5■■■□□ 18
XRN2Q9H0D6 KANK1-202ENST00000382286 2266 ntTSL 212.57□□□□□ -0.42e-10■■■□□ 18
XRN2Q9H0D6 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.5□□□□□ -0.411e-5■■■□□ 18
XRN2Q9H0D6 DLST-215ENST00000557012 698 ntTSL 212.49□□□□□ -0.415e-8■■■□□ 18
XRN2Q9H0D6 DLST-212ENST00000556190 565 ntTSL 412.49□□□□□ -0.415e-8■■■□□ 18
XRN2Q9H0D6 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.411e-5■■■□□ 18
XRN2Q9H0D6 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.421e-5■■■□□ 18
XRN2Q9H0D6 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.431e-5■■■□□ 18
XRN2Q9H0D6 WDR1-218ENST00000515743 4482 ntTSL 512.38□□□□□ -0.431e-5■■■□□ 18
XRN2Q9H0D6 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.431e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-221ENST00000596235 790 ntTSL 512.34□□□□□ -0.431e-5■■■□□ 18
XRN2Q9H0D6 IST1-207ENST00000534994 674 ntTSL 512.32□□□□□ -0.441e-5■■■□□ 18
XRN2Q9H0D6 WDR73-219ENST00000561329 1007 ntTSL 212.3□□□□□ -0.441e-5■■■□□ 18
XRN2Q9H0D6 MTHFD1-214ENST00000556771 813 ntTSL 212.29□□□□□ -0.445e-8■■■□□ 18
XRN2Q9H0D6 USP32-210ENST00000589761 430 ntTSL 212.29□□□□□ -0.441e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.441e-5■■■□□ 18
XRN2Q9H0D6 KHNYN-203ENST00000554268 760 ntTSL 3 BASIC12.27□□□□□ -0.451e-5■■■□□ 18
XRN2Q9H0D6 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.451e-5■■■□□ 18
XRN2Q9H0D6 DMKN-219ENST00000461300 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.451e-5■■■□□ 18
XRN2Q9H0D6 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.451e-5■■■□□ 18
XRN2Q9H0D6 DLST-209ENST00000555459 567 ntTSL 412.2□□□□□ -0.465e-8■■■□□ 18
XRN2Q9H0D6 DLST-208ENST00000555190 803 ntTSL 412.2□□□□□ -0.465e-8■■■□□ 18
XRN2Q9H0D6 TBCB-207ENST00000586868 466 ntTSL 3 BASIC12.17□□□□□ -0.461e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-213ENST00000444960 783 ntTSL 412.16□□□□□ -0.461e-5■■■□□ 18
XRN2Q9H0D6 KANK1-203ENST00000382289 1926 ntTSL 1 (best)12.12□□□□□ -0.472e-10■■■□□ 18
XRN2Q9H0D6 DLST-206ENST00000555071 1365 ntTSL 212.05□□□□□ -0.485e-8■■■□□ 18
XRN2Q9H0D6 G3BP2-204ENST00000499709 508 ntTSL 412.03□□□□□ -0.481e-5■■■□□ 18
XRN2Q9H0D6 IST1-216ENST00000539186 542 ntTSL 412.01□□□□□ -0.491e-5■■■□□ 18
XRN2Q9H0D6 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.491e-5■■■□□ 18
XRN2Q9H0D6 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.495e-8■■■□□ 18
XRN2Q9H0D6 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.491e-5■■■□□ 18
XRN2Q9H0D6 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC11.96□□□□□ -0.51e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.51e-5■■■□□ 18
XRN2Q9H0D6 TLN1-205ENST00000466916 446 ntTSL 211.93□□□□□ -0.55e-8■■■□□ 18
XRN2Q9H0D6 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.51e-5■■■□□ 18
XRN2Q9H0D6 WDR73-209ENST00000559178 933 ntTSL 311.91□□□□□ -0.51e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-226ENST00000619389 600 ntTSL 511.88□□□□□ -0.511e-5■■■□□ 18
XRN2Q9H0D6 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-10■■■□□ 18
XRN2Q9H0D6 LZTR1-209ENST00000463909 3505 ntTSL 1 (best)11.83□□□□□ -0.525e-8■■■□□ 18
XRN2Q9H0D6 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.526e-7■■■□□ 18
XRN2Q9H0D6 RNF220-213ENST00000480686 3835 ntTSL 211.78□□□□□ -0.521e-5■■■□□ 18
XRN2Q9H0D6 CA5A-203ENST00000568801 506 ntTSL 211.77□□□□□ -0.535e-8■■■□□ 18
XRN2Q9H0D6 G3BP2-217ENST00000511868 573 ntTSL 211.75□□□□□ -0.531e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-232ENST00000619944 740 ntTSL 511.74□□□□□ -0.531e-5■■■□□ 18
XRN2Q9H0D6 ACADM-217ENST00000534334 1149 ntTSL 1 (best)11.69□□□□□ -0.541e-5■■■□□ 18
XRN2Q9H0D6 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC11.67□□□□□ -0.541e-5■■■□□ 18
XRN2Q9H0D6 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.541e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-201ENST00000357854 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.551e-5■■■□□ 18
XRN2Q9H0D6 RPL23-201ENST00000245857 588 ntTSL 3 BASIC11.59□□□□□ -0.555e-8■■■□□ 18
XRN2Q9H0D6 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.551e-5■■■□□ 18
XRN2Q9H0D6 USP32-211ENST00000590133 2563 ntTSL 211.57□□□□□ -0.561e-5■■■□□ 18
XRN2Q9H0D6 TEPSIN-212ENST00000576090 3642 ntTSL 211.53□□□□□ -0.561e-5■■■□□ 18
XRN2Q9H0D6 DLST-214ENST00000556582 568 ntTSL 311.51□□□□□ -0.575e-8■■■□□ 18
XRN2Q9H0D6 NEK3-203ENST00000551355 727 ntTSL 511.49□□□□□ -0.571e-5■■■□□ 18
XRN2Q9H0D6 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC11.49□□□□□ -0.572e-6■■■□□ 18
XRN2Q9H0D6 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC11.4□□□□□ -0.581e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-208ENST00000425073 546 ntTSL 411.4□□□□□ -0.581e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-216ENST00000454017 978 ntTSL 311.4□□□□□ -0.581e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC11.38□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.592e-6■■■□□ 18
XRN2Q9H0D6 WDR73-217ENST00000560835 582 ntTSL 211.37□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-206ENST00000413688 551 ntTSL 411.37□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 DMKN-223ENST00000463292 642 ntTSL 1 (best)11.37□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 KHNYN-204ENST00000556255 2198 ntTSL 211.34□□□□□ -0.591e-5■■■□□ 18
XRN2Q9H0D6 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC11.3□□□□□ -0.62e-10■■■□□ 18
XRN2Q9H0D6 DMKN-241ENST00000476051 449 ntTSL 311.28□□□□□ -0.61e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-208ENST00000461812 531 ntTSL 511.27□□□□□ -0.611e-5■■■□□ 18
XRN2Q9H0D6 DHX30-202ENST00000395745 3887 ntTSL 1 (best)11.25□□□□□ -0.611e-5■■■□□ 18
XRN2Q9H0D6 TECR-219ENST00000600076 484 ntTSL 311.21□□□□□ -0.611e-5■■■□□ 18
XRN2Q9H0D6 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-5■■■□□ 18
XRN2Q9H0D6 TYK2-208ENST00000527481 628 ntTSL 311.2□□□□□ -0.622e-6■■■□□ 18
XRN2Q9H0D6 ITCH-204ENST00000479215 205 ntTSL 311.18□□□□□ -0.621e-5■■■□□ 18
XRN2Q9H0D6 DLST-204ENST00000554612 1479 ntTSL 211.18□□□□□ -0.625e-8■■■□□ 18
XRN2Q9H0D6 DLST-201ENST00000238671 1464 ntTSL 211.17□□□□□ -0.625e-8■■■□□ 18
XRN2Q9H0D6 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.626e-7■■■□□ 18
XRN2Q9H0D6 IPO4-221ENST00000625289 297 ntTSL 5 BASIC11.15□□□□□ -0.625e-8■■■□□ 18
XRN2Q9H0D6 DLST-213ENST00000556460 563 ntTSL 311.15□□□□□ -0.625e-8■■■□□ 18
XRN2Q9H0D6 EEF2-207ENST00000600794 352 ntTSL 311.13□□□□□ -0.631e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-212ENST00000616949 811 ntTSL 511.12□□□□□ -0.631e-5■■■□□ 18
XRN2Q9H0D6 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.631e-5■■■□□ 18
XRN2Q9H0D6 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.641e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-209ENST00000507701 678 ntTSL 210.99□□□□□ -0.651e-5■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 271.3 ms