Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NPAP1P7-201ENST00000613027 823 ntBASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RPAP1Q9BWH6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.54■■□□□ 1.2
RPAP1Q9BWH6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 AL645929.1-201ENST00000420084 975 ntBASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 AC034232.1-201ENST00000506026 1064 ntBASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 AC009113.1-201ENST00000570267 2443 ntBASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RPAP1Q9BWH6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 RASA4DP-201ENST00000460726 1199 ntBASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 Z98044.1-201ENST00000632503 1764 ntBASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 AC104581.1-202ENST00000635932 2618 ntBASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 GPAT2P1-201ENST00000444924 1672 ntBASIC22.52■■□□□ 1.2
RPAP1Q9BWH6 KRT8P32-201ENST00000512863 1461 ntBASIC22.52■■□□□ 1.19
RPAP1Q9BWH6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RPAP1Q9BWH6 AL023284.2-201ENST00000405850 579 ntBASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RPAP1Q9BWH6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms