Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 TEX21P-204ENST00000641479 1693 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AL032819.2-201ENST00000624543 2162 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 RNF152P1-201ENST00000397754 604 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AC117947.1-201ENST00000427448 529 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AC063952.2-201ENST00000498792 1227 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 TNXA-203ENST00000507684 2038 ntBASIC12.93□□□□□ -0.34
UPK3BQ9BT76 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.93□□□□□ -0.34
UPK3BQ9BT76 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AC005332.8-201ENST00000622750 2735 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 KRT8P45-201ENST00000414328 1447 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 HOMER2P1-201ENST00000455653 964 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 YBX1P2-201ENST00000489612 999 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AC022616.7-201ENST00000525383 220 ntBASIC12.92□□□□□ -0.34
UPK3BQ9BT76 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
UPK3BQ9BT76 AC004408.2-201ENST00000623613 2777 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms