Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.62■□□□□ 0.09
FOXC2Q99958 MIR7706-201ENST00000613747 67 ntBASIC15.62■□□□□ 0.09
FOXC2Q99958 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXC2Q99958 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXC2Q99958 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 AL157384.1-201ENST00000445995 2473 ntBASIC15.62■□□□□ 0.09
FOXC2Q99958 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.62■□□□□ 0.09
FOXC2Q99958 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.62■□□□□ 0.09
FOXC2Q99958 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
FOXC2Q99958 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 AL109659.2-201ENST00000606809 1674 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 ZNF815P-204ENST00000434898 1737 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.61■□□□□ 0.09
FOXC2Q99958 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.61■□□□□ 0.09
FOXC2Q99958 SCARNA2-201ENST00000458748 420 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 PGAM5P1-201ENST00000518923 814 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 AC027796.2-201ENST00000575326 344 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.61■□□□□ 0.09
FOXC2Q99958 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.61■□□□□ 0.09
FOXC2Q99958 AP001160.2-201ENST00000596071 487 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 AC024563.2-201ENST00000603282 481 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 AC027601.4-201ENST00000611259 610 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 AC055717.3-201ENST00000622967 595 ntBASIC15.61■□□□□ 0.09
FOXC2Q99958 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
FOXC2Q99958 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
FOXC2Q99958 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
FOXC2Q99958 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
FOXC2Q99958 LINC01521-201ENST00000504184 1943 ntBASIC15.6■□□□□ 0.09
FOXC2Q99958 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.6■□□□□ 0.09
FOXC2Q99958 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXC2Q99958 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXC2Q99958 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXC2Q99958 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.6■□□□□ 0.09
FOXC2Q99958 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.6■□□□□ 0.09
FOXC2Q99958 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 FAM215A-202ENST00000632077 792 ntBASIC15.6■□□□□ 0.09
FOXC2Q99958 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
FOXC2Q99958 AP005212.1-201ENST00000581547 1997 ntBASIC15.6■□□□□ 0.09
FOXC2Q99958 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
FOXC2Q99958 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms