Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.36■□□□□ 0.05
S1PR3Q99500 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
S1PR3Q99500 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.36■□□□□ 0.05
S1PR3Q99500 CKBP1-201ENST00000565489 1086 ntBASIC15.36■□□□□ 0.05
S1PR3Q99500 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.36■□□□□ 0.05
S1PR3Q99500 AC130371.2-201ENST00000619443 611 ntBASIC15.36■□□□□ 0.05
S1PR3Q99500 AC113410.3-201ENST00000623366 203 ntBASIC15.36■□□□□ 0.05
S1PR3Q99500 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
S1PR3Q99500 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.36■□□□□ 0.05
S1PR3Q99500 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.36■□□□□ 0.05
S1PR3Q99500 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
S1PR3Q99500 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.36■□□□□ 0.05
S1PR3Q99500 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
S1PR3Q99500 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
S1PR3Q99500 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.35■□□□□ 0.05
S1PR3Q99500 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.35■□□□□ 0.05
S1PR3Q99500 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.35■□□□□ 0.05
S1PR3Q99500 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 MYC-208ENST00000641036 567 ntBASIC15.35■□□□□ 0.05
S1PR3Q99500 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
S1PR3Q99500 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.35■□□□□ 0.05
S1PR3Q99500 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.35■□□□□ 0.05
S1PR3Q99500 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
S1PR3Q99500 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
S1PR3Q99500 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.35■□□□□ 0.05
S1PR3Q99500 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
S1PR3Q99500 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 AC135050.7-201ENST00000624508 2218 ntBASIC15.34■□□□□ 0.05
S1PR3Q99500 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 B3GAT3P1-201ENST00000471720 806 ntBASIC15.34■□□□□ 0.05
S1PR3Q99500 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.34■□□□□ 0.05
S1PR3Q99500 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.34■□□□□ 0.05
S1PR3Q99500 AC066615.1-201ENST00000640911 628 ntBASIC15.34■□□□□ 0.05
S1PR3Q99500 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.34■□□□□ 0.05
S1PR3Q99500 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.34■□□□□ 0.05
S1PR3Q99500 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
S1PR3Q99500 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms