Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 AP005242.2-201ENST00000580065 1175 ntBASIC17.63■□□□□ 0.41
BBS4Q96RK4 AC008622.2-201ENST00000617006 1229 ntBASIC17.63■□□□□ 0.41
BBS4Q96RK4 MYC-208ENST00000641036 567 ntBASIC17.63■□□□□ 0.41
BBS4Q96RK4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BBS4Q96RK4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS4Q96RK4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 MCCD1P1-208ENST00000445732 328 ntBASIC17.62■□□□□ 0.41
BBS4Q96RK4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS4Q96RK4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
BBS4Q96RK4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 AL109659.2-201ENST00000606809 1674 ntBASIC17.61■□□□□ 0.41
BBS4Q96RK4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 AL023284.2-201ENST00000405850 579 ntBASIC17.61■□□□□ 0.41
BBS4Q96RK4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 AP000525.1-201ENST00000608286 694 ntBASIC17.61■□□□□ 0.41
BBS4Q96RK4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 AC009113.1-201ENST00000570267 2443 ntBASIC17.61■□□□□ 0.41
BBS4Q96RK4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.61■□□□□ 0.41
BBS4Q96RK4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS4Q96RK4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 AC126763.1-201ENST00000552015 2118 ntBASIC17.6■□□□□ 0.41
BBS4Q96RK4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 AC112777.1-201ENST00000540175 1423 ntBASIC17.6■□□□□ 0.41
BBS4Q96RK4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms