Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 AC079781.4-201ENST00000641908 219 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 TEX21P-204ENST00000641479 1693 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALPK3Q96L96 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ALPK3Q96L96 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 AL357033.4-201ENST00000617703 1807 ntBASIC20.19■□□□□ 0.82
ALPK3Q96L96 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 AC113404.2-201ENST00000507884 177 ntBASIC20.19■□□□□ 0.82
ALPK3Q96L96 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ALPK3Q96L96 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ALPK3Q96L96 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 AC002310.6-201ENST00000624451 1377 ntBASIC20.18■□□□□ 0.82
ALPK3Q96L96 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 MTDHP4-201ENST00000600287 670 ntBASIC20.18■□□□□ 0.82
ALPK3Q96L96 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.18■□□□□ 0.82
ALPK3Q96L96 KRT18P28-201ENST00000453838 1332 ntBASIC20.18■□□□□ 0.82
ALPK3Q96L96 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ALPK3Q96L96 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.17■□□□□ 0.82
ALPK3Q96L96 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 LINC01521-201ENST00000504184 1943 ntBASIC20.17■□□□□ 0.82
ALPK3Q96L96 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK3Q96L96 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK3Q96L96 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK3Q96L96 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 MCCD1P2-201ENST00000423228 335 ntBASIC20.17■□□□□ 0.82
ALPK3Q96L96 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 AC009947.1-201ENST00000444350 727 ntBASIC20.17■□□□□ 0.82
ALPK3Q96L96 YBX1P5-201ENST00000509441 847 ntBASIC20.17■□□□□ 0.82
ALPK3Q96L96 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.17■□□□□ 0.82
ALPK3Q96L96 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ALPK3Q96L96 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms