Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM11Q96F44 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM11Q96F44 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 AP003071.4-201ENST00000562276 1284 ntBASIC19.65■□□□□ 0.74
TRIM11Q96F44 MIR3180-5-201ENST00000583743 153 ntBASIC19.65■□□□□ 0.74
TRIM11Q96F44 Z99916.2-201ENST00000604037 246 ntBASIC19.65■□□□□ 0.74
TRIM11Q96F44 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM11Q96F44 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM11Q96F44 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM11Q96F44 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM11Q96F44 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM11Q96F44 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
TRIM11Q96F44 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.64■□□□□ 0.74
TRIM11Q96F44 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM11Q96F44 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 MIR4785-201ENST00000585005 73 ntBASIC19.64■□□□□ 0.73
TRIM11Q96F44 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM11Q96F44 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM11Q96F44 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 UNC93B2-201ENST00000285383 730 ntBASIC19.63■□□□□ 0.73
TRIM11Q96F44 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 SLC25A1P2-201ENST00000430693 912 ntBASIC19.63■□□□□ 0.73
TRIM11Q96F44 AC008550.1-201ENST00000511500 884 ntBASIC19.63■□□□□ 0.73
TRIM11Q96F44 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM11Q96F44 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM11Q96F44 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM11Q96F44 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM11Q96F44 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms