Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 MIR564-202ENST00000385049 94 ntBASIC19.43■□□□□ 0.7
RNF34Q969K3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF34Q969K3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF34Q969K3 AC140113.3-201ENST00000605663 199 ntBASIC19.43■□□□□ 0.7
RNF34Q969K3 AC092865.7-201ENST00000641832 219 ntBASIC19.43■□□□□ 0.7
RNF34Q969K3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF34Q969K3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF34Q969K3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF34Q969K3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.43■□□□□ 0.7
RNF34Q969K3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF34Q969K3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF34Q969K3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 WWOX-216ENST00000569818 525 ntBASIC19.42■□□□□ 0.7
RNF34Q969K3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF34Q969K3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF34Q969K3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 OR6D1P-202ENST00000641007 5290 ntBASIC19.42■□□□□ 0.7
RNF34Q969K3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RNF34Q969K3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF34Q969K3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RNF34Q969K3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.41■□□□□ 0.7
RNF34Q969K3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF34Q969K3 RCN1P1-201ENST00000400413 996 ntBASIC19.41■□□□□ 0.7
RNF34Q969K3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.41■□□□□ 0.7
RNF34Q969K3 TMPOP1-202ENST00000424642 1267 ntBASIC19.41■□□□□ 0.7
RNF34Q969K3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF34Q969K3 RN7SL850P-201ENST00000579959 291 ntBASIC19.41■□□□□ 0.7
RNF34Q969K3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF34Q969K3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF34Q969K3 AL138966.2-201ENST00000621997 464 ntBASIC19.41■□□□□ 0.7
RNF34Q969K3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
RNF34Q969K3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RNF34Q969K3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF34Q969K3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF34Q969K3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF34Q969K3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF34Q969K3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 AP000523.1-201ENST00000398242 1049 ntBASIC19.4■□□□□ 0.7
RNF34Q969K3 BX664615.1-201ENST00000443558 458 ntBASIC19.4■□□□□ 0.7
RNF34Q969K3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms