Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 MIR149-201ENST00000384879 89 ntBASIC21.1■□□□□ 0.97
TNFRSF25Q93038 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFRSF25Q93038 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 AL354751.1-201ENST00000412768 1863 ntBASIC21.09■□□□□ 0.97
TNFRSF25Q93038 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.09■□□□□ 0.97
TNFRSF25Q93038 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 GCSHP2-201ENST00000560971 527 ntBASIC21.09■□□□□ 0.97
TNFRSF25Q93038 AL023973.1-201ENST00000624619 620 ntBASIC21.09■□□□□ 0.97
TNFRSF25Q93038 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TNFRSF25Q93038 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 AL162741.1-201ENST00000565563 1558 ntBASIC21.08■□□□□ 0.97
TNFRSF25Q93038 AL441883.1-201ENST00000566170 1045 ntBASIC21.08■□□□□ 0.97
TNFRSF25Q93038 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TNFRSF25Q93038 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.08■□□□□ 0.96
TNFRSF25Q93038 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 AC009102.3-201ENST00000623118 1491 ntBASIC21.07■□□□□ 0.96
TNFRSF25Q93038 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 AC093677.2-201ENST00000600169 1863 ntBASIC21.07■□□□□ 0.96
TNFRSF25Q93038 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 AL137013.1-201ENST00000432946 1228 ntBASIC21.07■□□□□ 0.96
TNFRSF25Q93038 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms