Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AP003041.3-201ENST00000527151 707 ntBASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AC010653.2-201ENST00000623505 997 ntBASIC18.14■□□□□ 0.49
ATL1Q8WXF7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AC034236.2-201ENST00000606662 1610 ntBASIC18.13■□□□□ 0.49
ATL1Q8WXF7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AP000593.1-201ENST00000393668 712 ntBASIC18.13■□□□□ 0.49
ATL1Q8WXF7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 NAPSB-206ENST00000562112 1266 ntBASIC18.13■□□□□ 0.49
ATL1Q8WXF7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AC073592.3-201ENST00000625118 1834 ntBASIC18.13■□□□□ 0.49
ATL1Q8WXF7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATL1Q8WXF7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AL596275.1-201ENST00000423464 877 ntBASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AC090164.3-201ENST00000610780 2143 ntBASIC18.12■□□□□ 0.49
ATL1Q8WXF7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATL1Q8WXF7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 AC007663.1-201ENST00000438948 1240 ntBASIC18.11■□□□□ 0.49
ATL1Q8WXF7 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.11■□□□□ 0.49
ATL1Q8WXF7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATL1Q8WXF7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms