Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 HYMAI.1-201ENST00000620949 238 ntBASIC21.87■■□□□ 1.09
STAG1Q8WVM7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 AL138781.2-201ENST00000617896 1843 ntBASIC21.87■■□□□ 1.09
STAG1Q8WVM7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
STAG1Q8WVM7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 AC004408.2-201ENST00000623613 2777 ntBASIC21.85■■□□□ 1.09
STAG1Q8WVM7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 AC079602.3-201ENST00000623931 403 ntBASIC21.85■■□□□ 1.09
STAG1Q8WVM7 AL358472.4-201ENST00000633140 710 ntBASIC21.85■■□□□ 1.09
STAG1Q8WVM7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
STAG1Q8WVM7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 AC112907.2-201ENST00000448639 330 ntBASIC21.84■■□□□ 1.09
STAG1Q8WVM7 AL671277.2-201ENST00000458060 996 ntBASIC21.84■■□□□ 1.09
STAG1Q8WVM7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 AL121956.5-201ENST00000625261 221 ntBASIC21.84■■□□□ 1.09
STAG1Q8WVM7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
STAG1Q8WVM7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 AC009065.1-201ENST00000564055 1225 ntBASIC21.83■■□□□ 1.09
STAG1Q8WVM7 AC091076.1-201ENST00000610741 619 ntBASIC21.83■■□□□ 1.09
STAG1Q8WVM7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
STAG1Q8WVM7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
STAG1Q8WVM7 AC126763.1-201ENST00000552015 2118 ntBASIC21.83■■□□□ 1.08
STAG1Q8WVM7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.83■■□□□ 1.08
STAG1Q8WVM7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.83■■□□□ 1.08
STAG1Q8WVM7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 MIR149-201ENST00000384879 89 ntBASIC21.82■■□□□ 1.08
STAG1Q8WVM7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 AC092597.1-201ENST00000487352 616 ntBASIC21.82■■□□□ 1.08
STAG1Q8WVM7 FAM86EP-206ENST00000510506 987 ntBASIC21.82■■□□□ 1.08
STAG1Q8WVM7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
STAG1Q8WVM7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms