Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 AC092329.2-201ENST00000598402 547 ntBASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 IRX1P1-201ENST00000438849 1838 ntBASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 AC093525.10-201ENST00000625130 1569 ntBASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 MIR662-201ENST00000384847 95 ntBASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 AC093484.2-201ENST00000580996 2166 ntBASIC19.49■□□□□ 0.71
SHKBP1Q8TBC3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 KRT8P32-201ENST00000512863 1461 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 AC093503.3-201ENST00000624917 2352 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 MIR564-202ENST00000385049 94 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 TPM4P1-201ENST00000436100 807 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 AC104390.1-201ENST00000555663 520 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 MIR3652-201ENST00000579335 131 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 AC010240.3-201ENST00000607688 395 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 HOXB1-202ENST00000577092 1414 ntBASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
SHKBP1Q8TBC3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 AC026396.1-201ENST00000419388 421 ntBASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 KRT8P26-201ENST00000534154 1276 ntBASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 KRT8P7-201ENST00000533003 1432 ntBASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHKBP1Q8TBC3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms