Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD2Q8NHY2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD2Q8NHY2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD2Q8NHY2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFWD2Q8NHY2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 SLC25A6P5-201ENST00000435663 894 ntBASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
RFWD2Q8NHY2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 GUSBP6-202ENST00000438529 1198 ntBASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFWD2Q8NHY2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 DUSP5P2-201ENST00000426873 1033 ntBASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 AC068587.9-201ENST00000641814 219 ntBASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.35■□□□□ 0.53
RFWD2Q8NHY2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD2Q8NHY2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD2Q8NHY2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFWD2Q8NHY2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms